Roca-Martínez, J., Dhondge, H. , Sattler, M. , Vranken, W.F. Deciphering the RRM-RNA recognition code: A computational analysis. PLoS Comput Biol 19(1): e1010859. DOI: 10.1371/journal.pcbi.1010859
Roca-Martínez, J., Lazar, T., Gavaldá-García, J., Bickel, D., Pancsa, R., Dixit, B.,
Tzavella, K., Ramasamy, P., Sanchez-Fornaris, M., Grau, I. Vranken, W.F.
Challenges in describing the conformation and dynamics of proteins with ambiguous behavior. Front. Mol. Biosci. 2022 Aug 3;(9).
DOI: 10.3389/fmolb.2022.959956
Ciani, C., Pérez-Ràfols, A., Bonomo, I., Micaelli, M., Esposito, A., Zucal, C., Belli, R., D’Agostino, V.G., Bianconi, I., Calderone, V., Cerofolini, L., Massidda, O., Whalen, M.B., Fragai, M., Provenzani, A. Identification and Characterization of an RRM-Containing, RNA Binding Protein in Acinetobacter baumannii. Biomolecules 2022, 12, 922. DOI: https://doi.org/10.3390/biom12070922
Dolcemascolo, R., Goiriz, L., Montagud-Martínez, R., Rodrigo, G. Gene regulation by a protein translation factor at the single-cell level. PLOS Computational Biology, 18(5): e1010087. DOI: 10.1371/journal.pcbi.1010087
Kagami, L.P., Orlando, G., Raimondi, D., Ancien, F., Dixit, B., Gavaldá-García, J., Ramasamy, P., Roca-Martínez, J., Tzavella, K., Vranken, W.F. b2bTools: online predictions for protein biophysical features and their conservation. Nucleic Acids Res., gkab425 (2021). DOI: 10.1093/nar/gkab425
Kagami, L., Roca-Martínez, J., Gavaldá-García, J., Ramasamy, P., Feenstra, K.A., Vranken, W.F. Online biophysical predictions for SARS-CoV-2 proteins. BMC Mol and Cell Biol 22, 23 (2021). DOI: 10.1186/s12860-021-00362-w